PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0010497.1_g000002.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

bHLH

Protein Properties

Length: 250aa MW: 27664.8 Da PI: 10.4135

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0010497.1_g000002.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	26.1	1.5e-08	171	211	9	54
HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 r RR+ri +++ L++l+P +K++ a++L +A++Y+k L Rmu_sc0010497.1_g000002.1 171 ARHRRERISERIRILQRLVPGG-----TKMDTASMLDEAIHYVKFL 211 699***************87.....8**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 250 aa Download sequence
MDIDMLKSSS AGHDLHHPHH HMDMMTMMMQ QSPEFYHNTP PTFSEIDFTW GSSITPNNIG 60 TIVPQPMFHN PTSPSQSQPT LLNPNPSSSS VSFLSGANPI HSNPIKQAAA AAGALSIPGT 120 NSYEKRSSMA AMREMIFRIA AMQPIQIDPE AVKPPKRRNV KISKDPQSVA ARHRRERISE 180 RIRILQRLVP GGTKMDTASM LDEAIHYVKF LKKQVQTLER AGADRPVGVG FMGPQLGNVN 240 YSVGSMQMLR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G67060.1	4e-42	bHLH family protein