PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0010546.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family B3
Protein Properties Length: 106aa    MW: 12123 Da    PI: 10.3218
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0010546.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3413.3e-13291051998
                                -HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                         B3  19 pkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                                p + ++++   +  +      ed++gr+Wev+     + +r++l++GW  F + n++k gD++ ++l++  + ++v +++r
  Rmu_sc0010546.1_g000001.1  29 PTEWCRKYlPANRYKFLLRNAEDLEGRTWEVNG--VPTNDRVILSAGWAAFLRGNQVKKGDVCWLELES--KSKMVAHIIR 105
                                66666666522222223345688999*******..99999**************************865..5556888877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 106 aa     Download sequence    
ARENAKQFKS KFPAVAITIG NSSYYAGFPT EWCRKYLPAN RYKFLLRNAE DLEGRTWEVN  60
GVPTNDRVIL SAGWAAFLRG NQVKKGDVCW LELESKSKMV AHIIRK