PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0010731.1_g000002.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

WRKY

Protein Properties

Length: 577aa MW: 62277.9 Da PI: 6.8485

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0010731.1_g000002.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.9	1.3e-30	314	372	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ Rmu_sc0010731.1_g000002.1 314 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAvGCPVRKQVQRCAEDRTILITTYEGNHNHP 372 7*********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 577 aa Download sequence
MDKGWGLTLD SESLGFFLNK PPPSADPPPN KRTNPFGGGD RMFSGIEFPV KSRPADENRV 60 AVDEVDFFSD KNKNKNDDQE LKASNNTSVS VKKENWSGLD AVNTVLHLVT VNTGSDQSTV 120 DDGVSSDQAD NKRAKIHELA QLQFELQRMN AENQRLKEML GQVTDNYKAL QMHLVAVMQQ 180 QQQSQAAADQ TSQDHDQTIE GKSEEKRHEI GSSGSLVPRQ FLNLGPREET KADNEVSNSS 240 SEARTLSASP QNNVSTNGKR VGREESPESE TQGCEPNKVA KHNSPPKQID QATEATMRKA 300 RVSVRARSEA PMITDGCQWR KYGQKMAKGN PCPRAYYRCT MAVGCPVRKQ VQRCAEDRTI 360 LITTYEGNHN HPLPPAAMAM ASTTTAAASM LLSGSMSSAD GIMNPNNLLA RAILPCSSSV 420 ATISASAPFP TVTLDLTTSP PLQFQRPQQG QFQLPFPGQP QNFGPSASNP QLPQGFGQAL 480 YNQSKFSGLQ LSQELMNSTL AHQTQQQQQG QPSSFADTVS AATAAITADP TFTAALAAAI 540 TSIIGGSSHP NNNNSTTSNN SNGGNNNNNK INSFPGN

Sequence ? help Back to Top

Protein Sequence Length: 577 aa Download sequence

MDKGWGLTLD SESLGFFLNK PPPSADPPPN KRTNPFGGGD RMFSGIEFPV KSRPADENRV  60
AVDEVDFFSD KNKNKNDDQE LKASNNTSVS VKKENWSGLD AVNTVLHLVT VNTGSDQSTV  120
DDGVSSDQAD NKRAKIHELA QLQFELQRMN AENQRLKEML GQVTDNYKAL QMHLVAVMQQ  180
QQQSQAAADQ TSQDHDQTIE GKSEEKRHEI GSSGSLVPRQ FLNLGPREET KADNEVSNSS  240
SEARTLSASP QNNVSTNGKR VGREESPESE TQGCEPNKVA KHNSPPKQID QATEATMRKA  300
RVSVRARSEA PMITDGCQWR KYGQKMAKGN PCPRAYYRCT MAVGCPVRKQ VQRCAEDRTI  360
LITTYEGNHN HPLPPAAMAM ASTTTAAASM LLSGSMSSAD GIMNPNNLLA RAILPCSSSV  420
ATISASAPFP TVTLDLTTSP PLQFQRPQQG QFQLPFPGQP QNFGPSASNP QLPQGFGQAL  480
YNQSKFSGLQ LSQELMNSTL AHQTQQQQQG QPSSFADTVS AATAAITADP TFTAALAAAI  540
TSIIGGSSHP NNNNSTTSNN SNGGNNNNNK INSFPGN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-116	WRKY family protein