PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0010971.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family FAR1
Protein Properties Length: 188aa    MW: 21742.8 Da    PI: 9.3373
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0010971.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR167.24.1e-2146138190
                       FAR1   1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtkl 81 
                                +fYn+YAk +GF vr+++++ s + +g++t+ ++vCs +gkr+ee  + +++ +++++etr +C + +kv+ ++  + + v+++
  Rmu_sc0010971.1_g000001.1  46 SFYNAYAKAMGFGVRNDYKRLSiRITGRVTSLRLVCSAQGKRREEYMSnKKRVHKPKKETRFNCPCLFKVRYRSnINAYIVDDF 129
                                5******************999999*******************9988345556799****************9899******* PP

                       FAR1  82 eleHnHela 90 
                                 ++H+H+la
  Rmu_sc0010971.1_g000001.1 130 ITNHSHQLA 138
                                *******97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    
MDGSYESSMC NGSDCNEMQY KGVRYDKLST EDLKGQEFKI VEEAESFYNA YAKAMGFGVR  60
NDYKRLSIRI TGRVTSLRLV CSAQGKRREE YMSNKKRVHK PKKETRFNCP CLFKVRYRSN  120
INAYIVDDFI TNHSHQLAQA HDSHLLRSHR SVEDHHLALA TSMQKVSVVL HMNTLLIDQE  180
VLRMSGLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.13e-14FAR1 family protein