PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0011021.1_g000013.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family C3H
Protein Properties Length: 181aa    MW: 19828 Da    PI: 9.1779
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0011021.1_g000013.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH19.61.6e-06132154426
                                ---SGGGGTS--TTTTT-SS-SS CS
                    zf-CCCH   4 elCrffartGtCkyGdrCkFaHg 26 
                                ++C +f  +  C++G++C+F H+
  Rmu_sc0011021.1_g000013.1 132 KPCIYFNSSRGCRHGANCSFQHD 154
                                69********************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    
MIEKLVTDPQ AVTRSPSMTS SDPFPLHINN TESIAPLSTA PSSGHFYPQA NMGGMGHLSD  60
QSLLSSIPVS SSPSVGPPPA KDINYYKSLI QQHGGDRHDS FPPFGNRPSH HSANQESFNG  120
YKSRDSKPKI MKPCIYFNSS RGCRHGANCS FQHDASFQQQ GSRVPEVQNA KRMKVDREIS  180
S