PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0011039.1_g000001.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

Protein Properties

Length: 236aa MW: 26574.4 Da PI: 4.6457

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0011039.1_g000001.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	51.4	1.9e-16	9	87	15	99
-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 15 rlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 +lp kf++++gg+ s + l+ + g +Wev + ++++++++++kGW eF ++ L+ g f+vF ++g+s+f v +f+k Rmu_sc0011039.1_g000001.1 9 GQRLPYKFVKKYGGE--LSHSVCLKVRGGSKWEVDV--TRRDCKVWFEKGWPEFSNSCSLDHGHFLVFGYEGNSKF--DVCIFDK 87 4689******988..7789***********..********************************9999..9999997 PP

Sequence ? help Back to Top
Protein Sequence Length: 236 aa Download sequence
MYLIQFSDGQ RLPYKFVKKY GGELSHSVCL KVRGGSKWEV DVTRRDCKVW FEKGWPEFSN 60 SCSLDHGHFL VFGYEGNSKF DVCIFDKTAT EIDYPITVED DDSSGEILED CPKGSRNSGD 120 KSPLPGSPPC KKNRKSSTGK PEINPKIQMD DDDDEENDES DESSEEGEDE DNHGIQKETA 180 FQRAKAYKPA DPHFVVAINP SCTRGGYLHV PSLFSKTYLV KQPTQIMLQT VSNEEP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18990.1	1e-24	B3 family protein