PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0011073.1_g000003.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family FAR1
Protein Properties Length: 96aa    MW: 11057.5 Da    PI: 8.4873
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0011073.1_g000003.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR128.35.8e-093183154
                       FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrt 54
                               kfY +YA++v F vr+ + ++   +g++  r++ C+k+g++ + k +  +e+++
  Rmu_sc0011073.1_g000003.1 31 KFYTDYARRVVFFVRVMQRRRG-IDGRTLARRLGCNKQGFSPNPKGNLGREKKP 83
                               6****************98887.9999**************9999885555544 PP
Sequence ? help Back to Top
Protein Sequence    Length: 96 aa     Download sequence    
MDLEEEEEEE VVAVDGSLEV NMGNSEGEAK KFYTDYARRV VFFVRVMQRR RGIDGRTLAR  60
RLGCNKQGFS PNPKGNLGRE KKPELVHEKV ATRQSW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G12850.24e-12FAR1 family protein