PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0011148.1_g000002.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

WOX

Protein Properties

Length: 175aa MW: 19310.2 Da PI: 4.4009

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0011148.1_g000002.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27.9	3.9e-09	7	44	24	57
S--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 24 ypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 p+ e+++e+ +l ++++++V++WFqN +a+e++ Rmu_sc0011148.1_g000002.1 7 CPTPEQIQEICLNLqqygEIEDKNVFFWFQNLKARERQ 44 599*********************************97 PP
2	Wus_type_Homeobox	61.8	1.4e-20	7	45	26	64
Wus_type_Homeobox 26 tPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 P+ e+iq+i +L++yG+iedkNVf+WFQN kaRerqk Rmu_sc0011148.1_g000002.1 7 CPTPEQIQEICLNLQQYGEIEDKNVFFWFQNLKARERQK 45 699***********************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 175 aa Download sequence
MGRSRTCPTP EQIQEICLNL QQYGEIEDKN VFFWFQNLKA RERQKLREFR NVRVGGSLDL 60 NFGSTSSTDD GRSIDLNFGS PGSPSTDRSI DLNFGSRVGY GVDGSIMDQR GEYHQEIETL 120 PLFPMHGENI FGNMKTTSEG GSGYGYYSGG WDDNNGGSCI SLELSLYSSG AADMA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G05770.1	5e-14	WOX family protein