PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0011258.1_g000003.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NAC
Protein Properties Length: 223aa    MW: 25488.9 Da    PI: 4.5772
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0011258.1_g000003.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM50.37.8e-1677352128
                        NAM  52 kaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                                +a++ e +fF+++  ky++++r+nr+tk+gyWk tgk+           g k+tL+fy+ r pk+++t+Wv+hey l
  Rmu_sc0011258.1_g000003.1   7 EAQDMERFFFTRKYYKYNKSSRSNRSTKKGYWKITGKE----------RGNKRTLTFYQDRVPKSNETSWVIHEYYL 73 
                                5577899****************************993..........5899***********************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 223 aa     Download sequence    
MLGTDTEAQD MERFFFTRKY YKYNKSSRSN RSTKKGYWKI TGKERGNKRT LTFYQDRVPK  60
SNETSWVIHE YYLPGNGVIS YLKQAQGDFV ICHLMIKSDK KDSSRSNEGE PGNAGVSNCE  120
NQAADEMDQE GREELLFHQP QPQGDRCFSA LWSRASHELE AVPQTNSTND DCNELESPFG  180
DGDSCFLDWN EVSTCDEYEI VYDVSPQLCD PPEKNSGFTL TST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01550.18e-13NAC family protein