PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0011758.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family C3H
Protein Properties Length: 155aa    MW: 17065 Da    PI: 6.1316
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0011758.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH38.51.9e-125783127
                               --S---SGGGGTS--TTTTT-SS-SSS CS
                    zf-CCCH  1 yktelCrffartGtCkyGdrCkFaHgp 27
                               ++++ C +++rtG C yG++C+F+H++
  Rmu_sc0011758.1_g000001.1 57 PGEPDCIYYLRTGLCGYGSNCQFNHPK 83
                               5789*********************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 155 aa     Download sequence    
MRVHAISVLL MPDTRQALKH AFPNQSDGVE EGFWRLTINE NQDGGVVAQS NLYPDRPGEP  60
DCIYYLRTGL CGYGSNCQFN HPKYASQAAQ YSGELPERVG QPDCGLFHSN SSPFLLANDD  120
LKQNKPNEIK AVPIANGFFH GGSGAHDQGF SHFLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G04990.26e-26C3H family protein