PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0011940.1_g000008.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

TCP

Protein Properties

Length: 210aa MW: 23138.3 Da PI: 10.3171

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0011940.1_g000008.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	78.5	1.9e-24	48	139	2	81
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt...........ssssasec. 73 +g kdr+ k++T++g+Rd vRl a++a++f+ qd+L + ++sk+++WL+++ak+ai+el ++ ++ss++ + Rmu_sc0011940.1_g000008.1 48 TGWKDRNNKVYTAKGPRDHLVRLAAHTAIQFYNAQDRLRYYRPSKAVNWLIKKAKAAIDELDELppwnpnsisvqTTSSPTVSi 131 6779************************************************************77665544442111111111 PP TCP 74 eaesssss 81 +a++++++ Rmu_sc0011940.1_g000008.1 132 SAAQDKQN 139 11111111 PP

Sequence ? help Back to Top
Protein Sequence Length: 210 aa Download sequence
MGESHNHLHH CAMTLSSTTS RLGLGIRTAS SSTTSEIVEA RGHILRATGW KDRNNKVYTA 60 KGPRDHLVRL AAHTAIQFYN AQDRLRYYRP SKAVNWLIKK AKAAIDELDE LPPWNPNSIS 120 VQTTSSPTVS ISAAQDKQNT SLHFSMVEAP SSLSSNWRGT MVGSSGVAEL VNQNSSNFLQ 180 VRMVWRSKLL IFVCLQLPLI EVGLKAEAVG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	2e-37	TCP family protein