PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0011974.1_g000003.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

Protein Properties

Length: 111aa MW: 12580.8 Da PI: 10.5448

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0011974.1_g000003.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	48.5	1.6e-15	18	111	1	99
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS..-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesg..rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvF 82 ffkv +p +++++ + ++p f ++h + +++ ++ + sg + ++vkl + ++ +++kGW+ F+++n++ +gD++ F Rmu_sc0011974.1_g000003.1 18 FFKVILPGYNTEQ-LYSIPTAFYRKHLS--AGNYEVAFLKISGgtKWYKVKL--VPSLQTAFMSKGWSVFAHDNQIVVGDVCAF 96 7888888777776.69********43..3567899999777655558999..**************************** PP EE-SSSEE..EEEEE-S CS B3 83 kldgrsefelvvkvfrk 99 +l++ ++vv+++rk Rmu_sc0011974.1_g000003.1 97 ELVK--ANKMVVHILRK 111 986..6667999986 PP

Sequence ? help Back to Top
Protein Sequence Length: 111 aa Download sequence
MARRIAKNGG IKEERPSFFK VILPGYNTEQ LYSIPTAFYR KHLSAGNYEV AFLKISGGTK 60 WYKVKLVPSL QTAFMSKGWS VFAHDNQIVV GDVCAFELVK ANKMVVHILR K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G49480.1	1e-09	B3 family protein