PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0011976.1_g000005.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family B3
Protein Properties Length: 145aa    MW: 16276.8 Da    PI: 4.9777
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0011976.1_g000005.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B334.53.7e-11621203796
                                EEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEE CS
                         B3  37 tledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkv 96 
                                ++ +   +sWe+ +  + +++   v ++ W+ Fv++n L++gD ++F+l+g ++++ v+kv
  Rmu_sc0011976.1_g000005.1  62 MVLSFGDKSWEMIY--NETKRLkLVDRQSWRAFVDDNSLRAGDGCIFELTGCDSTKVVFKV 120
                                5566778*******..55554448889*********************9986776666665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    
MEDSAQSRAT PTIELHGDEF WPLSGKPFFD IMLTKSHVKP LYQMEIPAKL NPVLPAGASV  60
PMVLSFGDKS WEMIYNETKR LKLVDRQSWR AFVDDNSLRA GDGCIFELTG CDSTKVVFKV  120
QILKGDIPAE LVDKYSGETE KPIII