PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0012051.1_g000001.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

TCP

Protein Properties

Length: 210aa MW: 22988.2 Da PI: 9.9391

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0012051.1_g000001.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	91.9	1.3e-28	47	142	1	87
TCP 1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt...........ssssasec 73 a+g+kdrhs ++T++g+Rd RvRl a+ ++f+d qd+LG+ ++sk+++WL+++ak+ i+el+++ + +s+ + Rmu_sc0012051.1_g000001.1 47 ATGRKDRHSMVCTAKGPRDHRVRLAAHSTIQFYDAQDRLGYYRPSKAVDWLIKKAKATIDELNELplwnpnsisvqT-TSS-PT 128 589**************************************************************777766665431.222.11 PP TCP 74 eaesssssasnsss 87 + s + ++n s Rmu_sc0012051.1_g000001.1 129 VPISVAQDTQNASL 142 22222222222222 PP

Sequence ? help Back to Top
Protein Sequence Length: 210 aa Download sequence
MGESHNNLHH RAMTSSSAAS RLGLGIRSAS SSTASEIMEA RGHILRATGR KDRHSMVCTA 60 KGPRDHRVRL AAHSTIQFYD AQDRLGYYRP SKAVDWLIKK AKATIDELNE LPLWNPNSIS 120 VQTTSSPTVP ISVAQDTQNA SLHFSMVEAP SSLSANRRGA MVDSSGVAEL VNQNGSNFLQ 180 VRMVWRPKLL IFVCLQLPLI EVGLEAEVVS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	9e-42	TCP family protein