PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0012301.1_g000004.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WRKY
Protein Properties Length: 100aa    MW: 11199.7 Da    PI: 8.8385
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0012301.1_g000004.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY108.72.9e-343189159
                               ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                       WRKY  1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59
                               ldDgy+WrKYGqK+v+g+++prsYY+Ct agCpv+k+ver+++dpk v++tYeg+Hnh+
  Rmu_sc0012301.1_g000004.1 31 LDDGYCWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKSVITTYEGKHNHD 89
                               59********************************************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 100 aa     Download sequence    
MDVGGIDVTP VVKPIREPQV VVHTPSEVDI LDDGYCWRKY GQKVVRGNPN PRSYYKCTNA  60
GCPVRKHVER ASHDPKSVIT TYEGKHNHDV MMSHSGGTRI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26640.12e-50WRKY family protein