PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0012443.1_g000007.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family C2H2
Protein Properties Length: 255aa    MW: 28889.5 Da    PI: 6.791
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0012443.1_g000007.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.10.000287597123
                               EEETTTTEEESSHHHHHHHHHHT CS
                    zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                               ++C++C k F ++  L  H++ H
  Rmu_sc0012443.1_g000007.1 75 FECQYCFKEFANSQALGGHQNAH 97
                               89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 255 aa     Download sequence    
MENTWESEDQ HGYSAGSSVD HDHKKLRLFG FELNPYKNVD ENFKACAEGD ESVNSSNTWK  60
ASTSSEAEQL DNKKFECQYC FKEFANSQAL GGHQNAHKKE RMKKKRLQLQ ARKASINYYL  120
QPFQNFNHPH GSAASASWFY DPSSYVNNTE QFTLHEESQI SFNPYDQNGS NGSAQVSNWY  180
ALTRGAQFPY QQEQDDHSSK FTLTQTDRSG ESRPVIFNKP SSLPASTTQS SCKPLDLQLG  240
IGLPSKIQRS SRSEV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10480.16e-17C2H2 family protein