PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0012640.1_g000006.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 194aa    MW: 21583 Da    PI: 9.0864
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0012640.1_g000006.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox46.94.8e-153191357
                               --SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
                   Homeobox  3 kRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                               +++t+t++q+++L+el+++   r p+ e+ +++  +l    +++ ++V++WF N++a ek+
  Rmu_sc0012640.1_g000006.1 31 TKWTPTTDQIRILKELYYNkgVRSPTVEQVQRICLQLkrygKIENKNVFYWFGNHKAWEKQ 91
                               79***************97689***********************************9986 PP
2Wus_type_Homeobox95.16.1e-312993265
          Wus_type_Homeobox  2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65
                               ++t+WtPt++Qi+iL+ely+ +G+r+P+ e++qri  +L++yGkie+kNVfyWF N+ka e+qk+
  Rmu_sc0012640.1_g000006.1 29 SSTKWTPTTDQIRILKELYYnKGVRSPTVEQVQRICLQLKRYGKIENKNVFYWFGNHKAWEKQKK 93
                               689***************9779*****************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    
MEPQTQQPTE DGGSNKAAGS SANRLCRQSS TKWTPTTDQI RILKELYYNK GVRSPTVEQV  60
QRICLQLKRY GKIENKNVFY WFGNHKAWEK QKKRFTSDVH VPMQRSGLVG NGNGTNWKPE  120
DQYINFGSSA SASASSAGVM IAFNGQMGNY GGYGSMNLVK SFSDCSILAG GGTSSTFFDM  180
NEEQIFMEQR GEDN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.12e-33WOX family protein