PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0013001.1_g000012.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

TCP

Protein Properties

Length: 120aa MW: 13194.1 Da PI: 8.6667

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0013001.1_g000012.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	86.9	4.8e-27	37	100	2	65
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt 65 + +kd hsk++T++g+Rd v l a++ ++f+d+qd+LG+d++s +++WL+++akpai+el++ Rmu_sc0013001.1_g000012.1 37 TCRKDHHSKVCTAKGPRDHLVLLAAHTTIQFYDVQDRLGYDRPSMAVDWLIKKAKPAIDELPSW 100 789**********************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 120 aa Download sequence
MRDSAFSIKL HGCSTMTASS CTSSEIVEAR GHILRATCRK DHHSKVCTAK GPRDHLVLLA 60 AHTTIQFYDV QDRLGYDRPS MAVDWLIKKA KPAIDELPSW NPNSIFVQTT SSPTVPISAA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	4e-37	TCP family protein