PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0013090.1_g000002.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 227aa    MW: 25871.4 Da    PI: 4.5717
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0013090.1_g000002.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.18e-17104154255
                        AP2   2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                                +y+GVr+++ +g+++AeIrdp     k  r++lg+f+t  +Aaka++ a+ kl+g
  Rmu_sc0013090.1_g000002.1 104 HYRGVRRRP-WGKFAAEIRDP---ArKGSRVWLGTFDTDVDAAKAYDFAAFKLRG 154
                                7********.**********8...4445**********99*************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MAATQEQDES TLELIRQHLL GDFTFTDSFI TNLNYEQSPE ISYFQPIKSE YSISESESAS  60
PVSNYRNPKP EPIAEEEPMS SKSEPKRKSS SSNSSSSTGE AARHYRGVRR RPWGKFAAEI  120
RDPARKGSRV WLGTFDTDVD AAKAYDFAAF KLRGRKAILN FPLEAGESDP PSNTGRKRRK  180
SVKQEEEEEE EEEAPAPEAE EMEVQSWVDW DGEDARRLVW FLTIIYC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1175184GRKRRKSVKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07580.16e-35ERF family protein