PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0013358.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family MYB_related
Protein Properties Length: 127aa    MW: 14587.8 Da    PI: 9.0182
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0013358.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding29.61.6e-0982110129
                                TSSS-HHHHHHHHHHHHHTTTT-HHHHHH CS
            Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIar 29 
                                +++WT+eE+  l+ +v ++G g W+tI +
  Rmu_sc0013358.1_g000001.1  82 KQKWTPEEEAALKAGVLKHGAGKWRTILS 110
                                79*************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 127 aa     Download sequence    
MGVDPVRSNP RNFFSFFRTY QCSSVVCWDF TDRNHPHQQY HVKSFGYAWP YCAAADVILC  60
EFQRCADFVR KSFGLLLMGA PKQKWTPEEE AALKAGVLKH GAGKWRTILS DKEFGAILHL  120
RSNVDLK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67580.13e-25MYB_related family protein