PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0013358.1_g000004.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family MYB_related
Protein Properties Length: 132aa    MW: 15078.8 Da    PI: 4.9473
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0013358.1_g000004.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding347e-11959247
                               SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHHH CS
            Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqky 47
                               ++WT+eE+  l+ +v+++G g Wk I +        ++R+   +k +w+ +
  Rmu_sc0013358.1_g000004.1  9 QKWTAEEEAALLAGVAKHGVGKWKIILEDSEfgpilTHRSNHKLKYKWRRW 59
                               79****************************999***************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 132 aa     Download sequence    
MEGECQEPQK WTAEEEAALL AGVAKHGVGK WKIILEDSEF GPILTHRSNH KLKYKWRRWS  60
VRLSGNSPFM ADEAAEEAQI ASDTEEEQRV SEMKEIQGVS ETKEKHRISK SAEDTESMLQ  120
LANEIYERCS RG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49950.12e-12MYB_related family protein