PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0013450.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NAC
Protein Properties Length: 96aa    MW: 11666.6 Da    PI: 7.4156
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0013450.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM48.72.5e-151359249
                        NAM  2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk 49
                                pGfrFhPt+eel+ +yLk  v gk+l++ ++i+ ++iy+++PwdLp 
  Rmu_sc0013450.1_g000001.1 13 LPGFRFHPTEEELLEFYLKSVVFGKRLRF-DIIEFLNIYRHDPWDLPV 59
                               59*************************99.99**************94 PP
Sequence ? help Back to Top
Protein Sequence    Length: 96 aa     Download sequence    
MASEMTPPAE LKLPGFRFHP TEEELLEFYL KSVVFGKRLR FDIIEFLNIY RHDPWDLPVI  60
NIWVLFGWCY RIFKDWRKGV VLFCAQGQEA WEWRKA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17040.15e-23NAC family protein