PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0013657.1_g000002.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

bZIP

Protein Properties

Length: 407aa MW: 45264.8 Da PI: 5.1757

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0013657.1_g000002.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	32.2	2.3e-10	44	87	2	45
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 k+ k rr+++NReAAr+sR+RKka++++Le+ +L++ ++L Rmu_sc0013657.1_g000002.1 44 KDQKTLRRLAQNREAARKSRLRKKAYVQQLETSRLKLSQLEQEL 87 567899*************************9877777766655 PP

Sequence ? help Back to Top
Protein Sequence Length: 407 aa Download sequence
MADSPRTDIS TDVDTDDKNQ RFDRDQYAIT AAVSDSSDKS KDPKDQKTLR RLAQNREAAR 60 KSRLRKKAYV QQLETSRLKL SQLEQELQRA RQQGIFISSS GGDPAHSTSG NGAMAFDVEY 120 GRWLEDQNRQ INELRSAVNS HASDAELRII VDGILAHYDD IFRLKGTAAK ADVFHLLSGM 180 WKTPAERCFL WLGGFRSSEV LKLLVNQLEP LTEQQLMGIT NLQQSSQQAE DALSQGMEAL 240 QQSLAETLSS GSLGSTGSSG NVANYMGQMA MAMGKLGTLE GFIRQADNLR QQTLQQMHRI 300 LTTRQGFSWG LSSTLLSPSI VDFIVLFIEL VHVGGDEDGG YCRWEERSLV FLFRWLHSLS 360 GLSLTWEILL ALAVGDIARY GDILSGSRLK DSLDNYPGST DFEEQGL

Sequence ? help Back to Top

Protein Sequence Length: 407 aa Download sequence

MADSPRTDIS TDVDTDDKNQ RFDRDQYAIT AAVSDSSDKS KDPKDQKTLR RLAQNREAAR  60
KSRLRKKAYV QQLETSRLKL SQLEQELQRA RQQGIFISSS GGDPAHSTSG NGAMAFDVEY  120
GRWLEDQNRQ INELRSAVNS HASDAELRII VDGILAHYDD IFRLKGTAAK ADVFHLLSGM  180
WKTPAERCFL WLGGFRSSEV LKLLVNQLEP LTEQQLMGIT NLQQSSQQAE DALSQGMEAL  240
QQSLAETLSS GSLGSTGSSG NVANYMGQMA MAMGKLGTLE GFIRQADNLR QQTLQQMHRI  300
LTTRQGFSWG LSSTLLSPSI VDFIVLFIEL VHVGGDEDGG YCRWEERSLV FLFRWLHSLS  360
GLSLTWEILL ALAVGDIARY GDILSGSRLK DSLDNYPGST DFEEQGL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G12250.1	1e-141	bZIP family protein