PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0014032.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 181aa    MW: 20266.6 Da    PI: 9.4026
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0014032.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox491.1e-153090256
                               T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHH CS
                   Homeobox  2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakek 56
                                +R+ +t++q ++L+el+     + p+ e+ ++++ +l    +++ ++V++WF N+Ra+ek
  Rmu_sc0014032.1_g000001.1 30 NTRWLPTTDQKRILKELYDDkgVKSPTVEQVQRITLQLkwygQIENKNVFYWFRNQRAREK 90
                               58*****************6579*************************************9 PP
2Wus_type_Homeobox87.81.2e-282990262
          Wus_type_Homeobox  2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRer 62
                               ++tRW Pt++Q +iL+ely+ +G+++P+ e++qrit +L+ yG+ie+kNVfyWF N++aRe+
  Rmu_sc0014032.1_g000001.1 29 SNTRWLPTTDQKRILKELYDdKGVKSPTVEQVQRITLQLKWYGQIENKNVFYWFRNQRAREK 90
                               789****************999***************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 181 aa     Download sequence    
MEPQNRHPTQ DGGSNKAAES SPNMHCKQSN TRWLPTTDQK RILKELYDDK GVKSPTVEQV  60
QRITLQLKWY GQIENKNVFY WFRNQRAREK LSKKKLTSDV QVPKQRSGLV GGSINLNFGS  120
TSSADVGGSI MEQRGEDHQE VKTVPLFPMH SEDIFGNMKT TSDEGGGHGG GSYISLELNL  180
S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.15e-26WOX family protein