PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0014200.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family MYB_related
Protein Properties Length: 132aa    MW: 14908.8 Da    PI: 8.2377
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0014200.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding22.91.9e-071356344
                               SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS
            Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44
                               +WT    +l+ +a + + ++   +W+  a+ +g g++++++k ++
  Rmu_sc0014200.1_g000001.1 13 SWTLKQNKLFENALAVYDKDtqdRWHNLAKAVG-GKSAEEVKRHY 56
                               7********************************.**********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 132 aa     Download sequence    
MASLTSSRNS NSSWTLKQNK LFENALAVYD KDTQDRWHNL AKAVGGKSAE EVKRHYEILV  60
QDLMHIESEA TPLLIRLRPP VDDGYQPHRR AKGVAGWACF RLVAGGDQDW GLRQEAFSFS  120
QMKTTADWCS VA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19510.14e-28MYB_related family protein