PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0014485.1_g000006.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

MYB

Protein Properties

Length: 258aa MW: 28859 Da PI: 10.8122

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0014485.1_g000006.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	43.9	5.4e-14	63	110	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed +l ++v + G g+W+++ g++R++k+c++rw ++l Rmu_sc0014485.1_g000006.1 63 KGPWTAVEDRILMEYVSKQGEGNWNSVQWNSGLKRCGKSCRLRWANHL 110 79******************************************9996 PP
2	Myb_DNA-binding	24.9	4.9e-08	116	143	1	29
TSSS-HHHHHHHHHHHHHTTTT-HHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIar 29 +g++T+eE+ l++++++++G++ W++ a+ Rmu_sc0014485.1_g000006.1 116 KGAFTPEEERLILELHAKYGNK-WARMAS 143 799*****************.9886 PP

Sequence ? help Back to Top
Protein Sequence Length: 258 aa Download sequence
MYSLKKLRLL WLVVFYIDLA VIIIIIMAHN GINDINGTAM YGEGNPSELS CVFMGGNNMG 60 LRKGPWTAVE DRILMEYVSK QGEGNWNSVQ WNSGLKRCGK SCRLRWANHL RPNLKKGAFT 120 PEEERLILEL HAKYGNKWAR MASQNLHLIQ CSKLKKARLW LLELIKRDIS IKKLKMPIKF 180 TAKALGLQDV PGGGGGFLVS KQTPLQVMAC SSKKKRGRPL GARNKNPSKS SKVSAEDVLS 240 VLYSGNPPSR NPKGKEKV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G32460.2	2e-45	MYB family protein