PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0015755.1_g000003.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

NAC

Protein Properties

Length: 498aa MW: 55505.4 Da PI: 5.3848

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0015755.1_g000003.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	79.7	6.4e-25	7	80	55	128
NAM 55 ekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 e+ wyfFskrd+ky +g+r+nra++ g+Wkatg++ ++++++gel+g kk+L f kgr+++ kt+W mheyr+ Rmu_sc0015755.1_g000003.1 7 EDGWYFFSKRDRKYLNGTRPNRAARGGRWKATGSEVNIIDENGELIGHKKVLEFKKGRHKQDIKTEWKMHEYRI 80 679*********************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 498 aa Download sequence
MFDIIREDGW YFFSKRDRKY LNGTRPNRAA RGGRWKATGS EVNIIDENGE LIGHKKVLEF 60 KKGRHKQDIK TEWKMHEYRI KDEKEDIPRP KRKKGEGNMQ LDTVLCKIYL NTRGNGNTDE 120 KDAVTTETSD QGIMVTDAGT SHDNDISVLK QGVGQVQPLD SLLMMSSMQP QVHNNTTGGF 180 NNVDRIPNSS TIPDCFYSST SMNNGIMVTD TVTSHDKDIS VLEHGPGQLQ PLGSSLMCSL 240 QPQVHTIGGF KNMDHISNSS TVPNICFYSS NSMNGNMVTD TVTFHDKDIS VLKQGAGQVQ 300 PLGSSLMCSL QPQVHNNTTG GFNNMYHISN SSTIPDNCFY SSTPMSNGVC DSTQCTHHGG 360 SMTNGASGSG YRWGSFTHLH HQNYKNYSMS SEQMPSSSTW YPSEHPLQYP TEIWTQSEPE 420 NHEMPQVDDS TSVSLPARYI EYESMLVNKE EADIMPVQHA NKDEADDDGL QFLSIPDEVH 480 KNDSKLASFD DEINSGLD

Sequence ? help Back to Top

Protein Sequence Length: 498 aa Download sequence

MFDIIREDGW YFFSKRDRKY LNGTRPNRAA RGGRWKATGS EVNIIDENGE LIGHKKVLEF  60
KKGRHKQDIK TEWKMHEYRI KDEKEDIPRP KRKKGEGNMQ LDTVLCKIYL NTRGNGNTDE  120
KDAVTTETSD QGIMVTDAGT SHDNDISVLK QGVGQVQPLD SLLMMSSMQP QVHNNTTGGF  180
NNVDRIPNSS TIPDCFYSST SMNNGIMVTD TVTSHDKDIS VLEHGPGQLQ PLGSSLMCSL  240
QPQVHTIGGF KNMDHISNSS TVPNICFYSS NSMNGNMVTD TVTFHDKDIS VLKQGAGQVQ  300
PLGSSLMCSL QPQVHNNTTG GFNNMYHISN SSTIPDNCFY SSTPMSNGVC DSTQCTHHGG  360
SMTNGASGSG YRWGSFTHLH HQNYKNYSMS SEQMPSSSTW YPSEHPLQYP TEIWTQSEPE  420
NHEMPQVDDS TSVSLPARYI EYESMLVNKE EADIMPVQHA NKDEADDDGL QFLSIPDEVH  480
KNDSKLASFD DEINSGLD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69490.1	5e-27	NAC family protein