PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0015961.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family MYB
Protein Properties Length: 213aa    MW: 24023 Da    PI: 8.6505
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0015961.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding61.61.6e-191562148
                               TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
            Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                               +g+WT+eEd +l+++++ +G ++Wkt+a+  g++R++k+c++rw++yl
  Rmu_sc0015961.1_g000001.1 15 KGAWTAEEDRKLAEYIEIHGAKRWKTVASIAGLNRCGKSCRLRWLNYL 62
                               79********************************************97 PP
2Myb_DNA-binding48.12.6e-1568113148
                                TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
            Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                                rg+ + +E++l+++++k+lG++ W++Ia +++ gRt++++k++w+++l
  Rmu_sc0015961.1_g000001.1  68 RGNISGDEEDLILRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNSHL 113
                                6777889***************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MAPKNDGSTK KVMNKGAWTA EEDRKLAEYI EIHGAKRWKT VASIAGLNRC GKSCRLRWLN  60
YLRPNIKRGN ISGDEEDLIL RLHKLLGNRW SLIAGRLPGR TDNEIKNYWN SHLSKKIKQK  120
NEKATLASAA QEISTTSTTT TTPPQKALNE TSSVPADKDE EEQVKLGTSS DGIFDVNEFF  180
DFSTEGSYGL EWVNKFLELD EDPMAAAYRE NNK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13540.12e-53MYB family protein