PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0016637.1_g000006.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

E2F/DP

Protein Properties

Length: 447aa MW: 49593.3 Da PI: 4.5888

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0016637.1_g000006.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	86.4	2.2e-27	120	185	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r ++sL+llt+kf++l++++e+gi++ln++a++L +v ++RRiYDi+NVLe+++liekk kn+irwkg Rmu_sc0016637.1_g000006.1 120 RFDSSLGLLTKKFINLIKQAEDGILDLNKAAETL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIRWKG 185 6789****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 447 aa Download sequence
MRRHLVFESN KPPFFPPADY HQFSGGAQRP ADQEPEAIVV RSPQFIRKGA VDNNEAENND 60 WTNSPGYNNM IQSPLQTPVS TTKAGKTNNR TKVSKGKSGP QTPASNAGSP CPLTPAGSCR 120 FDSSLGLLTK KFINLIKQAE DGILDLNKAA ETLEVQKRRI YDITNVLEGI GLIEKKLKNR 180 IRWKGFDASR PGDLDADLSI LQGEVETLSL KERSLDDRIR EMEEKLRDLS GDENNRKWLF 240 VTEEDIKGLP CFQNETLIAI KAPHGTTLEV PDPDEAVDYP QRRYRIILRS TMGPIDVYLV 300 SQFEEKFDDI NGVEPPVSFP IASGSGSNEQ STTEMVNGQN RGKEIDPRAQ QAQVDQTCSD 360 VNASQEFGGG MMRIVPSDVD NDADYWLLSG VDVSITDMWR TDSAIEWNGE DMLNADFGLP 420 DVSTPRPQTP PSGIVEVPSH AVNFSQR

Sequence ? help Back to Top

Protein Sequence Length: 447 aa Download sequence

MRRHLVFESN KPPFFPPADY HQFSGGAQRP ADQEPEAIVV RSPQFIRKGA VDNNEAENND  60
WTNSPGYNNM IQSPLQTPVS TTKAGKTNNR TKVSKGKSGP QTPASNAGSP CPLTPAGSCR  120
FDSSLGLLTK KFINLIKQAE DGILDLNKAA ETLEVQKRRI YDITNVLEGI GLIEKKLKNR  180
IRWKGFDASR PGDLDADLSI LQGEVETLSL KERSLDDRIR EMEEKLRDLS GDENNRKWLF  240
VTEEDIKGLP CFQNETLIAI KAPHGTTLEV PDPDEAVDYP QRRYRIILRS TMGPIDVYLV  300
SQFEEKFDDI NGVEPPVSFP IASGSGSNEQ STTEMVNGQN RGKEIDPRAQ QAQVDQTCSD  360
VNASQEFGGG MMRIVPSDVD NDADYWLLSG VDVSITDMWR TDSAIEWNGE DMLNADFGLP  420
DVSTPRPQTP PSGIVEVPSH AVNFSQR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36010.1	1e-174	E2F/DP family protein