PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0016898.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family FAR1
Protein Properties Length: 122aa    MW: 13928 Da    PI: 9.116
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0016898.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR167.92.6e-2134118290
                       FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtklele 84 
                                fYn+YAke+ Fs+  ++s ++k+n++ +++++vC+k+g+++ e +k      +r   + gCka++ v ++k +g++ ++ +++ 
  Rmu_sc0016898.1_g000001.1  34 FYNRYAKEAVFSIISHSSATNKDNTQLMRKEYVCYKQGTSKVEGEK-----CKRGLPKLGCKARIAVVRKKeSGRYAISVFVEG 112
                                ***************************************9998877.....999***********9888777************ PP

                       FAR1  85 HnHela 90 
                                HnH+l+
  Rmu_sc0016898.1_g000001.1 113 HNHPLT 118
                                ****97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 122 aa     Download sequence    
MELEDDHVYI PQVKAELMPK LHQEFETIDD VAAFYNRYAK EAVFSIISHS SATNKDNTQL  60
MRKEYVCYKQ GTSKVEGEKC KRGLPKLGCK ARIAVVRKKE SGRYAISVFV EGHNHPLTSP  120
PR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.12e-13FAR1 family protein