PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0017116.1_g000001.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

HB-other

Protein Properties

Length: 166aa MW: 18704.7 Da PI: 4.5082

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0017116.1_g000001.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	20.8	6.7e-07	16	45	30	57
HHHHHHHC..TS-HHHHHHHHHHHHHHHHC CS Homeobox 30 reeLAkkl..gLterqVkvWFqNrRakekk 57 eL ++ +++ ++V++WFqN +a+e++ Rmu_sc0017116.1_g000001.1 16 QMELQAQQptEIENKNVFFWFQNLKARERQ 45 44444443459*****************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 166 aa Download sequence
MEPRTLQLME LQTQQQMELQ AQQPTEIENK NVFFWFQNLK ARERQKLREF RNVRVGGSLD 60 LNFGSTSSTD DGRSIDLNFG STGSTSTDRS IDLNFGLRVG YGVDGSIMEQ RGEYHQEIET 120 LPLFPMHGED IFGNMKTTSE GGSGYGGGSR ISLELSLNFY RDADMA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G05770.1	5e-08	WOX family protein