PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0017266.1_g000002.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family TALE
Protein Properties Length: 161aa    MW: 18619.9 Da    PI: 6.5183
Description TALE family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0017266.1_g000002.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox30.94.8e-101041382155
                                HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS
                   Homeobox  21 knrypsaeereeLAkklgLterqVkvWFqNrRake 55 
                                k +yp+++++  LA+++gL++rq+ +WF N+R ++
  Rmu_sc0017266.1_g000002.1 104 KWPYPTEADKIALAESTGLDQRQINNWFINQRKRH 138
                                569*****************************885 PP
2ELK24.94.6e-095879122
                        ELK  1 ELKhqLlrKYsgyLgsLkqEFs 22
                               +LK++L rK+++++g+Lk EFs
  Rmu_sc0017266.1_g000002.1 58 DLKNRLFRKFGSHIGTLKLEFS 79
                               69*******************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    
MTSLDASSDA DTEFMLKLNA VHHMCIFDSD EGAVSSEEEF SGGELEVQEA QARGEDRDLK  60
NRLFRKFGSH IGTLKLEFSK KKKKGKLPKE ARQALLHWWS VHYKWPYPTE ADKIALAEST  120
GLDQRQINNW FINQRKRHWR PSENMQFAVM DNLSGPFFAD D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G23380.21e-49TALE family protein