PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0017523.1_g000002.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family MYB_related
Protein Properties Length: 251aa    MW: 27939.6 Da    PI: 10.4242
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0017523.1_g000002.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding40.18.5e-134292146
                               TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS
            Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46
                               +++WT eE+e l  +v+++G+g Wk I +          R+  ++k++w++
  Rmu_sc0017523.1_g000002.1 42 KQKWTSEEEEALRAGVRKHGTGKWKDIQKDPEfnpflSSRSNIDLKDKWRN 92
                               79***********************************9***********99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MGWRQIKGSS SDHTRRAKPV AAVFDTEISN TEPEPQKMGN PKQKWTSEEE EALRAGVRKH  60
GTGKWKDIQK DPEFNPFLSS RSNIDLKDKW RNMSVSGVGG PREKARMRPR DSPVTLFSTP  120
QPSAAAPVKR DPAAALLKRE SSAAPVKREA AASLVKGEPV ADDSPTEAKT EAKTAPMYNA  180
MIFEALSNST DPNGLETGAI ANFIEQRYVL EKKNEVPQNF RRLLSSRLRR LVAQEKLEKV  240
IGFDSFSSKY Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17520.12e-42MYB_related family protein