PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0017617.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family C2H2
Protein Properties Length: 93aa    MW: 10178.5 Da    PI: 9.046
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0017617.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H218.36.4e-067092223
                               EETTTTEEESSHHHHHHHHHH.T CS
                    zf-C2H2  2 kCpdCgksFsrksnLkrHirt.H 23
                                Cp Cg+ F+  ++L+ H++  H
  Rmu_sc0017617.1_g000001.1 70 ACPQCGEIFPKLESLELHQSIrH 92
                               6******************9988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 93 aa     Download sequence    
LGQETGLLSR KVTIRSESGS GTRTNRGGGA AYTSSNSSRG MQFRKLSGCY ECHYIVDPSR  60
YPVPRSTICA CPQCGEIFPK LESLELHQSI RHA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75710.16e-28C2H2 family protein