PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0017668.1_g000003.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 188aa    MW: 20434.8 Da    PI: 9.1791
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0017668.1_g000003.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.59e-20105156156
                        AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                                s y+GVr+++  g+W+AeIrdp+    r +r++lg+f t+eeAa+a++ a+++++g+
  Rmu_sc0017668.1_g000003.1 105 SEYRGVRQRP-GGKWAAEIRDPR----RaARVWLGTFQTEEEAARAYDTAALEFRGA 156
                                569*******.9*********82....48*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 188 aa     Download sequence    
MGSHSGALPK EQEHAIIVSA LKQVVRGGVR TNNAPSRPHQ PPPPQRIYYA SSSLPPTEGA  60
DQVVIPYSDS DTCPVCKMET DDCLGCGLFP PSEQYKGKGK KMKTSEYRGV RQRPGGKWAA  120
EIRDPRRAAR VWLGTFQTEE EAARAYDTAA LEFRGADRAK LNFPPSSDTG GTTSRALTDE  180
TKSPGSRT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13330.18e-28ERF family protein