PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0018344.1_g000004.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family G2-like
Protein Properties Length: 246aa    MW: 28174.9 Da    PI: 9.945
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0018344.1_g000004.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.66.7e-09105158245
                                SSS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHT.....TTS-HHHHHHHHH CS
            Myb_DNA-binding   2 grWTteEdellvdavkqlGgg.....tWktIartmg.....kgRtlkqcksrwq 45 
                                 +WT e + + v+av qlGg      t+k++ + m      +g+t k++ ++++
  Rmu_sc0018344.1_g000004.1 105 SPWTLEHHRRVVEAVIQLGGLsnsktTPKAVLKLMDeedrcQGLTTKMIAHHLL 158
                                58*****************88*******************************85 PP
2G2-like37.74.4e-12106157550
                    G2-like   5 rWtpeLHerFveaveqLGG..sekAtPktilelmk....vkgLtlehvkSHL 50 
                                 Wt e H+r veav qLGG  + k+tPk++l+lm+     +gLt + ++ HL
  Rmu_sc0018344.1_g000004.1 106 PWTLEHHRRVVEAVIQLGGlsNSKTTPKAVLKLMDeedrCQGLTTKMIAHHL 157
                                5******************434689*********83333579*******998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MNMSRFGVEG EHQGTTTPRM FEWTLEHHKQ FVNTFIFLGG GKEKVGVHNA LKAELLSLAG  60
CCCRSFYLDF HISLLGVLQK RSEALFSSNK VTLESLYVAP KKMSSPWTLE HHRRVVEAVI  120
QLGGLSNSKT TPKAVLKLMD EEDRCQGLTT KMIAHHLLGL YHLQKETQRL MAFGMAGGEE  180
ERELSLRELQ YLVFKALPLQ RNNVLYTNVK DPLLRQHLGL LKQVNMAHRI RLHIIKSERE  240
VLRAFQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G62670.18e-06ARR-B family protein