PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0018708.1_g000002.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family MYB_related
Protein Properties Length: 70aa    MW: 8247.78 Da    PI: 8.8886
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0018708.1_g000002.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.45e-11941942
                               HHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHH CS
            Myb_DNA-binding  9 dellvdavkqlGggtWktIartmgkgRtlkqcks 42
                               d +lvdav+++ g++Wk+I +++  gRt+ qc +
  Rmu_sc0018708.1_g000002.1  9 DRILVDAVEKYNGKNWKRIVECVR-GRTDVQCLH 41
                               789*********************.*******76 PP
Sequence ? help Back to Top
Protein Sequence    Length: 70 aa     Download sequence    
MILSSCLQDR ILVDAVEKYN GKNWKRIVEC VRGRTDVQCL HLRQKLISLD LVKGFWYKEE  60
DDLIIKLVAK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32730.11e-22MYB family protein