PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0019189.1_g000002.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 257aa    MW: 28116.6 Da    PI: 5.7556
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0019189.1_g000002.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.34.6e-194392255
                        AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                                ykGVr++  +g+WvAeIr+p   + r +r +lg+f+t  eAa a++aa++kl+g
  Rmu_sc0019189.1_g000002.1 43 TYKGVRQRT-WGKWVAEIREP---N-RgARLWLGTFDTSHEAAMAYDAAARKLYG 92
                               69****999.**********8...3.35************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
MLKSGIGSSV GVGERKTVKK PAQASSRKGC MRGKGGPENA TCTYKGVRQR TWGKWVAEIR  60
EPNRGARLWL GTFDTSHEAA MAYDAAARKL YGSEAKLNLP DQLVPHSPQP PVQNNNLQMA  120
QMQMANTSSG AACFPTVTGV LNNDVSVPVV LQDNTNSTYP VLIPFPNPSM QTCYGNTYEE  180
NNSNTTMSMD TKEEKNEGIY QGFWENVNTK VLPVFDDSIW AEAAMSIDFP VIENHGIFAS  240
NFVDGNPWEA LPASWCA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75490.11e-49ERF family protein