PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0020930.1_g000001.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

Trihelix

Protein Properties

Length: 127aa MW: 14599.2 Da PI: 7.5775

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0020930.1_g000001.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	38.6	2.7e-12	31	107	2	79
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstc 79 Wt+ l L++ ++ +e + r++ + ++W+ v++++ + g+ rs q + kwe l +yk i +++++ s s + Rmu_sc0020930.1_g000001.1 31 WTETDLLILVNEVTAVEADCRKEFSSFQKWKIVAQNCTALGVPRSLDQYRRKWEALLHDYKIIDHWNSQS-GASASYW 107 ********************************************************************85.4444445 PP

Sequence ? help Back to Top
Protein Sequence Length: 127 aa Download sequence
MKGEQTLPEF HHSNGGGSGS RRTRSQVAPD WTETDLLILV NEVTAVEADC RKEFSSFQKW 60 KIVAQNCTAL GVPRSLDQYR RKWEALLHDY KIIDHWNSQS GASASYWALE SDRRKQFGLP 120 QSFDREL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G31270.1	3e-36	Trihelix family protein