PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0021123.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family B3
Protein Properties Length: 232aa    MW: 26652.5 Da    PI: 10.2564
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0021123.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B345.61.2e-14501004498
                                -EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                         B3  44 rsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                                 +W v +  +   gr++l+kGWk+Fv++ngLk g+f++F++ g+s+f  +v ++ 
  Rmu_sc0021123.1_g000001.1  50 GTWLVDV--KSDNGRFFLQKGWKQFVHDNGLKLGEFLIFRYAGNSKF--YVDIYG 100
                                58*****..999999****************************9999..888875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MKYGLARYPF FDMKFLVTIG EYAFGRIPQA FRKHLAASVL QQSHLRTPAG TWLVDVKSDN  60
GRFFLQKGWK QFVHDNGLKL GEFLIFRYAG NSKFYVDIYG RHGCKKEFVM PARRSEKPFK  120
KRHGNESHRT NAVMGSSIHP KKKMDYQKLK GSAGENKTSQ ETMSVKSEPI DFELETSMDI  180
DESIRNMNSR ETMSFQPQVA NSALEAANRY SSNHPCFRTL LTETYVTKGI LV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06220.14e-15B3 family protein