PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0021850.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family GATA
Protein Properties Length: 92aa    MW: 10447 Da    PI: 10.8028
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0021850.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA44.91.6e-144176134
                       GATA  1 Cs..nCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34
                               C+  nC++++Tp+WRrgp  +ktL naCG++yrk +
  Rmu_sc0021850.1_g000001.1 41 CTnfNCRVSETPMWRRGPLESKTLWNACGIKYRKLK 76
                               55559****************************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 92 aa     Download sequence    
MRKFCVINVS HNKAKVGGSR KKKTTRCQRP APETDDQNRT CTNFNCRVSE TPMWRRGPLE  60
SKTLWNACGI KYRKLKLKEE QGEGTSGKGS SN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20750.12e-12GATA family protein