PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0022201.1_g000001.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

FAR1

Protein Properties

Length: 166aa MW: 19314.3 Da PI: 4.9945

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0022201.1_g000001.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	74.6	2.1e-23	84	165	1	85
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtklele 84 +fYn+YA+++GFsvrk k+++ +n + + +f+Cskeg++++++ + e++r r trtgCka+++ ++ ++ w+v++++ e Rmu_sc0022201.1_g000001.1 84 EFYNSYATRIGFSVRKGKKRRDAKN-VVRQINFMCSKEGFQQDSDPS-ETKRADRLDTRTGCKAMIRFTLA-EDMWRVSHFHAE 164 6***************9999555.5************9999.9******************.9********* PP FAR1 85 H 85 H Rmu_sc0022201.1_g000001.1 165 H 165 * PP

Sequence ? help Back to Top
Protein Sequence Length: 166 aa Download sequence
ASFDWIDEGF SLIGHEGWLW MKRKVSVFRG EKETDEVHVI DVESDDENNE GNNREDPSIV 60 NRQGSFDEDD LFGKMVCSEV EAYEFYNSYA TRIGFSVRKG KKRRDAKNVV RQINFMCSKE 120 GFQQDSDPSE TKRADRLDTR TGCKAMIRFT LAEDMWRVSH FHAEHG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	98	105	RKGKKRRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59470.2	6e-12	FAR1 family protein