PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0022454.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 261aa    MW: 28317.8 Da    PI: 4.9427
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0022454.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.24.2e-1885134255
                        AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                                 ++GVr ++ +g+Wv+eIr+p++   + r++lg++ tae+Aa+a++ a+++++g
  Rmu_sc0022454.1_g000001.1  85 TFRGVRMRS-WGKWVSEIREPRK---KSRIWLGTYPTAEMAARAHDVAARAIKG 134
                                59****998.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MAKKINIESD AQANLHTSSS SSSSSSSTLT THDSLIDKST ENDQNSDKVS SSKGQELNNG  60
SNEPNTKKRQ RSSSTEHGDG GRHPTFRGVR MRSWGKWVSE IREPRKKSRI WLGTYPTAEM  120
AARAHDVAAR AIKGASAYLN FPELAQTLPQ PASASPKDIQ AAAAKAASAF EEVKKCEAET  180
EEEEEEEATL PSKDEQTTTT ANTSISTACS SSSTSNDYDD KLFDLPDLFM DGTNGSDQFC  240
FSSSSSFFYV EMTILALKGQ T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44940.17e-31ERF family protein