PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0022763.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family M-type_MADS
Protein Properties Length: 106aa    MW: 12059.6 Da    PI: 7.5111
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0022763.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF368.8e-12450147
                               S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEE CS
                     SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgkly 47
                               k+i +k   +vt skRr+g++ KA   +  ++a++a+i fs+  k  
  Rmu_sc0022763.1_g000001.1  4 KKITDKESLKVTHSKRRKGLFRKADDFCSKTGAQIAIITFSPGMKPM 50
                               679999999********************************976655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 106 aa     Download sequence    
MGLKKITDKE SLKVTHSKRR KGLFRKADDF CSKTGAQIAI ITFSPGMKPM TFGQPSVESI  60
IDRYELCEQS SNVDDKEILD KDGHHGDGED LDLGARQENR RGWYER
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24840.19e-20M-type_MADS family protein