PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0023478.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family C2H2
Protein Properties Length: 164aa    MW: 18124.1 Da    PI: 7.3096
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0023478.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.42.6e-05104120117
                                EEETTTTEEESSHHHHH CS
                    zf-C2H2   1 ykCpdCgksFsrksnLk 17 
                                ++Cp Cgk+F+r  n++
  Rmu_sc0023478.1_g000001.1 104 FSCPVCGKTFNRYNNMQ 120
                                89*********988765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    
MHHQEDEDNS VFLTLGPPGQ PVHRHILYHQ QASSSSSTQP HHQNPNYSTN HEDGVTVALH  60
IGQPFTTSGP SSNNNNNNVH IGAPMEGQYW IPSPAQILVG PTQFSCPVCG KTFNRYNNMQ  120
VGEITLIRPH NETINKLITC YCSSCFVRCI CGGTARSTGR DQNR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13290.16e-24C2H2 family protein