PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0024464.1_g000003.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NAC
Protein Properties Length: 152aa    MW: 17739.9 Da    PI: 8.097
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0024464.1_g000003.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM84.12.8e-2621319128
                        NAM   9 PtdeelvveyLkkkvegkkleleevikevd...iykvePwdLpkkvkaeekewyfFskrdkkyatgk.rknratk.....sgyW 83 
                                Ptdeelv++yL +k+ ++ ++++++i+e++    y+ +P++L  +++ +e++w+fF+++d+ + +++ +++r ++      g+W
  Rmu_sc0024464.1_g000003.1   2 PTDEELVTHYLMNKACSRAVPVADAIQEINatrFYSNHPKSLV-TFSDGERDWFFFIHEDNDSCSSHaQRKRNVRevgngLGFW 84 
                                *******************999888887753338999*****6.7788999******99988764331333332223344789* PP

                        NAM  84 katgkdkevlskkgelvglkktLvfykg..rapkgektdWvmheyrl 128
                                k  g+++++++++g++  +k  L++++g  +++k+++t+W m ey+l
  Rmu_sc0024464.1_g000003.1  85 KPNGSENPIYNEDGNVFATKIYLTYFSGscHSNKPKRTHWKMVEYHL 131
                                **************************8755889999**********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 152 aa     Download sequence    
MPTDEELVTH YLMNKACSRA VPVADAIQEI NATRFYSNHP KSLVTFSDGE RDWFFFIHED  60
NDSCSSHAQR KRNVREVGNG LGFWKPNGSE NPIYNEDGNV FATKIYLTYF SGSCHSNKPK  120
RTHWKMVEYH LQIRREWVVL GRLQRGMDYT GF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15510.12e-14NAC family protein