PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0024604.1_g000003.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family MYB_related
Protein Properties Length: 284aa    MW: 31068.6 Da    PI: 5.5467
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0024604.1_g000003.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.92.2e-132351247
                               HHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
            Myb_DNA-binding 12 lvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                               ++ a++ +G++ W++Iar ++ gRt++ +k++w++ 
  Rmu_sc0024604.1_g000003.1  2 IIAAHTIHGNK-WAAIARLLP-GRTDNAIKNHWNST 35
                               689********.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MIIAAHTIHG NKWAAIARLL PGRTDNAIKN HWNSTLRRRD PDRMKSESGN MVEDISLDKT  60
IASSEETLSN GDVNSSKSME GKEVSSLEYT DDQHEDKVST DGLYGNEARE PCTLFRPVAR  120
VSAFSVYNHL GGQDPSSSLQ RPIPVQGPLV QAAKLDVGIC KLVEGIYGEW SVPDQCGHGC  180
CCTQNGRNTE NSLLGPDFVE FSEPPCFPSF ELAAIATDIS NLAWLKSGLE NSSARVTGDA  240
AGSIPSHASQ GQLGHFEESR MNHLFHHEER KDRLMSMKTN VLST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G09230.12e-72MYB family protein