PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0024939.1_g000001.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

FAR1

Protein Properties

Length: 246aa MW: 28278.3 Da PI: 8.8735

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0024939.1_g000001.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	61.6	2.3e-19	12	102	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.tekerrtraetrtgCkaklkvkkek.dgkwevtklel 83 fY +YAk +GF+ rk+ +++s r+g++t ++vCs eg+r e+ + +++ r +++ tr++C + +kv+ k ++ ++v ++++ Rmu_sc0024939.1_g000001.1 12 FYYAYAKAMGFDFRKDDKRTSARTGRVTICKWVCSAEGERLEKYMDnNNNVRMPKKLTRCHCPCLFKVRYFKeKNSYVVVDFKT 95 9*************************************99988745666779***********999899***** PP FAR1 84 eHnHela 90 +H+H+la Rmu_sc0024939.1_g000001.1 96 DHSHDLA 102 ***97 PP

Sequence ? help Back to Top
Protein Sequence Length: 246 aa Download sequence
MKFVTVEAAE TFYYAYAKAM GFDFRKDDKR TSARTGRVTI CKWVCSAEGE RLEKYMDNNN 60 NVRMPKKLTR CHCPCLFKVR YFKEKNSYVV VDFKTDHSHD LAQPQESHFL RSHRSVPDSH 120 LALATSMRRV SIKTCHAYQY MADISGGFAN VGFKMKDLYN KLDSSQREIV LEGDAKATLA 180 YLEGKAAEDK KLFCKYSTDE SNRLANLVWR DSTSLLDYCC FGDVLVFDST YKTNHYGKPL 240 VLFVGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-33	FAR1 family protein