PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0025647.1_g000001.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

TCP

Protein Properties

Length: 210aa MW: 23025.4 Da PI: 9.5379

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0025647.1_g000001.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	92.6	7.9e-29	49	141	3	83
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt...........ssssasec.. 73 g kdrh+k++T++g++d Rv l ++a++f+d+qd+LG+d++sk+++WL+++ak ai+el ++ + +s+ + Rmu_sc0025647.1_g000001.1 49 GLKDRHKKVCTAKGPKDHRVQLTTHTAIQFYDMQDQLGYDRPSKAVDWLIKKAKVAIDELEELplwnpnsiyvqT-TSSPIVli 131 669************************************************************888877777642.33322223 PP TCP 74 eaesssssas 83 +a+++ ++as Rmu_sc0025647.1_g000001.1 132 SAVQDTQNAS 141 3333333332 PP

Sequence ? help Back to Top
Protein Sequence Length: 210 aa Download sequence
MGESHKNLHH GAMTSSSASS RLGLGIRTAS SFTASEIVEA RGHILSTTGL KDRHKKVCTA 60 KGPKDHRVQL TTHTAIQFYD MQDQLGYDRP SKAVDWLIKK AKVAIDELEE LPLWNPNSIY 120 VQTTSSPIVL ISAVQDTQNA SLHFSMVEAP SSLSANRRGA MVGSSGVAEL VNQNSSNFLQ 180 VRMVWRPKLL IFVCLQLPLI KFGLETEVVG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	9e-41	TCP family protein