PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0026100.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family E2F/DP
Protein Properties Length: 108aa    MW: 12558.2 Da    PI: 4.6971
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0026100.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP76.52.7e-241711771
                    E2F_TDP 17 leksee.givtlnevakeLvse................dvknkrRRiYDilNVLealnliekkekneirwkg 71
                               +ek+e+ g++t+neva+eLv+e                d+kn+rRR+YD+lNVL+a+++i+k +k+ei+wkg
  Rmu_sc0026100.1_g000001.1  1 CEKVESkGRTTYNEVADELVAEfsdpingvtspdqqqyDEKNIRRRVYDALNVLMAMDIISK-DKKEIQWKG 71
                               7888888*******************************************************.*******98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 108 aa     Download sequence    
CEKVESKGRT TYNEVADELV AEFSDPINGV TSPDQQQYDE KNIRRRVYDA LNVLMAMDII  60
SKDKKEIQWK GLPRTSLNDI EELKTERLGL RGRIEKKAVY LQELEEQV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03415.11e-62E2F/DP family protein